What data is available for session m225-20210409-s01?
Let me try the MCP tools directly โ they should be available without needing to be loaded via ToolSearch.
The MCP tools aren't loading as deferred tools, so let me query the database and NAS directly using SQL and Python.
Good progress โ wh schema doesn't exist in this Redshift instance (it may be warehouse or similar). Let me fix the schema names.
Now I have the correct schema names. Let me run the full inventory.
Now I have all the correct column and schema names. Let me pull the complete inventory.
Here's a full inventory for m225-20210409-s01:
๐ Session: m225-20210409-s01
| Field | Value |
|---|---|
| Mouse | m225 |
| Date | 2021-04-09 |
| Session # | 1 |
๐ฅ Neural Recordings (4 total)
| recording_id | Modality | Substage | Frame Rate | Depth (ยตm) | FOV (px) |
|---|---|---|---|---|---|
| 109 | 1P | โ | 25.38 Hz | 59.9 | 512ร512 |
| 431 | 1P | โ | 25.38 Hz | 59.9 | 512ร512 |
| 110 | 2P | โ | 25.38 Hz | 59.9 | 512ร512 |
| 432 | 2P | โ | 25.38 Hz | 59.9 | 512ร512 |
Two recording IDs per modality โ likely different processing substages (e.g.,
merge/lsvs raw). Usemerge/lsfor analysis.
๐ Matched Cells
- 605 matched 1P/2P pairs
fraction_good_fit/fraction_explained_variance: not populated (older 3-colmatched_corrlist.matformat)
๐ง Cell Spatial Features
| Modality | Cells with spatial data |
|---|---|
| 1P | 810 |
| 2P | 677 |
๐พ Behavioral Traces
- 8,001 rows of behavioral data
- Columns:
sample_idx,stimulus_on,velocity,position,lick,reward,photodiode(empty),legacy_recording_id
โก Spike / Event Data
- Paired event concordance (v2): 605 pairs โ
- Temporal correlations: 605 pairs โ
- Event detection metrics v2: โ not populated for this session
- Cell signal quality: โ not populated for this session
๐ Stimulus Metadata
- โ Not in Airtable (
session_stimulus_metadatais empty for this session โ predates Airtable integration)
SQL used (key query):
-- Session info
SELECT session_id, subject_id, session_date, session_number
FROM core.dim_sessions WHERE session_id = 'm225-20210409-s01';
-- Recordings
SELECT recording_id, modality, framerate_hz, depth_um
FROM core.dim_neural_recordings WHERE session_id = 'm225-20210409-s01';
-- Matched pairs
SELECT COUNT(*), AVG(correlation_coefficient)
FROM prj_multiscope_1p2p.matched_cells WHERE session_id = 'm225-20210409-s01';
Summary: This session has paired 1P+2P recordings at 59.9 ยตm depth, 605 matched cell pairs, behavioral data (stimulus, velocity, position, lick/reward), spatial features for ~700โ800 cells, and spike concordance data. No Airtable stimulus metadata, and FGF/FEV fit quality metrics are unavailable (older corrlist format). Good candidate for trace visualization and matched-pair analysis.